../../tmp/servers/virsirnadb/1001637124
Result for your query siRNA sequence
| RED | =100 % Complementary sequence |
| . | =Identical residue |
| blue alphabets | =mismatch |
| _ | =Gap |
| Acc number | Strain name | Start | Alignment | End | % Identity |
| Query | virsi2340 | 1 | gcatttgactacacaggtt | 19 | |
| D90457.1 | CXA24CG Human coxsackievirus A24 DNA, complete genome | 6700 | ................... | 6718 | 100 |
| AF448783.1 | Human poliovirus 2 strain EGY93-034, complete genome | 6678 | ................... | 6696 | 100 |
| DQ358078.1 | Human coxsackievirus A20 serotype CAV20a, complete genome | 6681 | ................... | 6699 | 100 |
| DQ358078.1 | Human coxsackievirus A20 serotype CAV20a, complete genome | 5451 | ___.........g...___ | 5463 | 63 |
| X04468.1 | Poliovirus type 3 strain 23127 complete genome | 6672 | .................g. | 6690 | 94 |
| X04468.1 | Poliovirus type 3 strain 23127 complete genome | 2300 | ______...........__ | 2310 | 57 |
| X00595.1 | Poliovirus type 2 genome (strain Sabin 2 (P712, Ch, 2ab)) | 6676 | ..t................ | 6694 | 94 |
| AJ293918.1 | Human poliovirus type 3 complete genome, live-attenuated strain USOL- | 6673 | .................g. | 6691 | 94 |
| AF462419.1 | Human poliovirus 1 RUS-1161-96-001, complete genome | 6677 | ..t................ | 6695 | 94 |
| AY184220.1 | Human poliovirus 2 strain Sabin 2, complete genome | 6676 | ..t................ | 6694 | 94 |
| AF541919.1 | Human poliovirus 3 isolate PV3/NOR/01/8 polyprotein mRNA, complete cd | 6658 | ..t................ | 6676 | 94 |
| AY177685.1 | Human poliovirus 2, complete genome | 6676 | ..t................ | 6694 | 94 |
| AY278549.1 | Human poliovirus 2 isolate P2S/Mog65-3 (20120), complete genome | 6676 | ..t................ | 6694 | 94 |
| AY278553.1 | Human poliovirus 1 isolate P1W/Bar65 (19276), complete genome | 6673 | ..c................ | 6691 | 94 |
| AF448782.1 | Human poliovirus 2 strain EGY88-074, complete genome | 6676 | ........t.......... | 6694 | 94 |
| AF448782.1 | Human poliovirus 2 strain EGY88-074, complete genome | 5443 | .g..........g...___ | 5458 | 73 |
| AF111953.2 | Human poliovirus 1 isolate CHN-Hebei/91-2, complete genome | 6681 | .................g. | 6699 | 94 |
| AF111966.2 | Human poliovirus 1 isolate CHN-Hainan/93-2, complete genome | 6681 | .................c. | 6699 | 94 |
| AM040036.1 | Human poliovirus 2 complete virion genome, isolate PV2/5021-1/ISR99 | 6580 | .................a. | 6598 | 94 |
| DQ205099.1 | Human poliovirus 2 clone S2R9, complete genome | 6676 | ..t................ | 6694 | 94 |
| AM084225.1 | Human poliovirus 2 RNA for polyprotein, complete genome, genomic RNA, | 6676 | ........t.......... | 6694 | 94 |
| DQ890387.1 | Human poliovirus 2 strain USA9810768, complete genome | 6676 | ..t................ | 6694 | 94 |
| EF456706.1 | Human poliovirus 1 isolate 7/b/97 nonfunctional polyprotein gene, com | 6630 | .................g. | 6648 | 94 |
| EF456707.1 | Human poliovirus 3 isolate K/2002 polyprotein gene, complete cds | 6628 | ..t................ | 6646 | 94 |
| FJ898290.1 | Human poliovirus 2 strain Sabine 2 isolate CHN3024/HN/CHN/1999, compl | 6676 | ..t................ | 6694 | 94 |
| HM107835.1 | Human poliovirus 2 isolate CHN8316, complete genome | 6676 | ..t................ | 6694 | 94 |
| AY843302.1 | Human enterovirus 77 strain USA/TX97-10394, complete genome | 6624 | ............t...... | 6642 | 94 |
| AF326764.2 | Simian enterovirus 46 strain OM22 (P15), complete genome | 6611 | ........t.......... | 6629 | 94 |
| V01148.1 | Genome of human poliovirus type 1 (Mahoney strain). (One of two versi | 6669 | ..t..............g. | 6687 | 89 |
| V01150.1 | Human poliovirus strain Sabin 1 complete genome, strain Sabin 1 | 6677 | ..c..............g. | 6695 | 89 |
| AJ132960.1 | Human poliovirus 1, complete genome. Isolated from faeces of immunode | 6678 | ..c...........g.... | 6696 | 89 |
| AJ416942.1 | Human poliovirus 1 genomic RNA for polyprotein, strain CHAT 10A-11 | 6677 | ..c..............g. | 6695 | 89 |
| AF462418.1 | Human poliovirus 1 99/056-252-14, complete genome | 6677 | ..c..............g. | 6695 | 89 |
| AJ430385.1 | Human poliovirus 1 genomic RNA for polyprotein gene, strain Cox | 6677 | ..c..............g. | 6695 | 89 |
| AF405682.1 | Human poliovirus 1 isolate DOR00041C1, complete genome | 6677 | ..............t..c. | 6695 | 89 |
| AY184219.1 | Human poliovirus 1 strain Sabin 1, complete genome | 6677 | ..c..............g. | 6695 | 89 |
| AY278550.1 | Human poliovirus 2 isolate P2S/Mog65-1 (20003), complete genome | 6676 | ..c..............g. | 6694 | 89 |
| AY278551.1 | Human poliovirus 2 isolate P2S/Mog66-4 (21043), complete genome | 6676 | ..............g..c. | 6694 | 89 |
| AY278552.1 | Human poliovirus 2 isolate P2S/Mog65-2 (20077), complete genome | 6676 | ..t..............g. | 6694 | 89 |
| AF499635.1 | Human coxsackievirus A1 strain Tompkins, complete genome | 6631 | ..c.....t.......... | 6649 | 89 |
| AF499637.1 | Human coxsackievirus A13 strain Flores, complete genome | 6695 | ..t.....t.......... | 6713 | 89 |
| AF499639.1 | Human coxsackievirus A17 strain G12, complete genome | 6694 | ..............t..g. | 6712 | 89 |
| AF499643.1 | Human coxsackievirus A22 strain Chulman, complete genome | 6641 | ..t..............c. | 6659 | 89 |
| AF499643.1 | Human coxsackievirus A22 strain Chulman, complete genome | 5411 | ___.........g...t._ | 5425 | 68 |
| AF546702.1 | Human coxsackievirus A21 strain Kuykendall, complete genome | 6642 | ..t..............g. | 6660 | 89 |
| AF546702.1 | Human coxsackievirus A21 strain Kuykendall, complete genome | 5409 | .g..........g...___ | 5424 | 73 |
| AF465511.1 | Human coxsackievirus A13 strain Flores, complete genome | 6695 | ..t.....t.......... | 6713 | 89 |
| AF465515.1 | Human coxsackievirus A21 strain Kuykendall, complete genome | 6642 | ..t..............g. | 6660 | 89 |
| AF465515.1 | Human coxsackievirus A21 strain Kuykendall, complete genome | 5409 | .g..........g...___ | 5424 | 73 |
| AF538840.1 | Human poliovirus 1 isolate TCDCE01-135, complete genome | 6647 | ..c..............g. | 6665 | 89 |
| AF538842.1 | Human poliovirus 1 isolate TCDC01-330, complete genome | 6669 | ..c..............g. | 6687 | 89 |
| AF538843.1 | Human poliovirus 1 isolate TCDC01-861, complete genome | 6669 | ..c..............g. | 6687 | 89 |
| AF111961.2 | Human poliovirus 1 isolate CHN-Guangdong/92-2, complete genome | 6681 | ..............t..a. | 6699 | 89 |
| AJ544513.1 | Human poliovirus 2 gene for polyprotein, genomic RNA, isolate 102050 | 6676 | ..t..............c. | 6694 | 89 |
| AY876912.1 | Human enterovirus Ningbo3-02, complete genome | 6695 | ..t.....t.......... | 6713 | 89 |
| AY928383.1 | Human poliovirus 1 isolate d261-2002037607 polyprotein gene, complete | 6669 | ..c..............g. | 6687 | 89 |
| AY928384.1 | Human poliovirus 1 isolate d224-2002037606 polyprotein gene, complete | 6669 | ..c..............g. | 6687 | 89 |
| AY928385.1 | Human poliovirus 1 isolate d054-2002037604 polyprotein gene, complete | 6669 | ..c..............g. | 6687 | 89 |
| AY928386.1 | Human poliovirus 1 isolate d179-2002037605 polyprotein gene, complete | 6669 | ..c..............g. | 6687 | 89 |
| AY928387.1 | Human poliovirus 1 isolate d018-2002037602 polyprotein gene, complete | 6669 | ..c..............g. | 6687 | 89 |
| AB205395.1 | Human enterovirus C genomic RNA, complete genome, strain: Cambodia-02 | 6668 | ..t..c............. | 6686 | 89 |
| DQ443001.1 | Human coxsackievirus A24 isolate DSO-52/2005, complete genome | 6700 | ..t.....t.......... | 6718 | 89 |
| DQ443002.1 | Human coxsackievirus A24 isolate DSO-26/2005, complete genome | 6700 | ..t.....t.......... | 6718 | 89 |
| EF682343.1 | Human poliovirus 1 strain USA10774 polyprotein gene, complete cds | 6651 | ..c..............g. | 6669 | 89 |
| EF682344.1 | Human poliovirus 1 strain USA10775 polyprotein gene, complete cds | 6651 | ..c..............g. | 6669 | 89 |
| EF682345.1 | Human poliovirus 1 strain USA10773 polyprotein gene, complete cds | 6651 | ..c..............g. | 6669 | 89 |
| EF682346.1 | Human poliovirus 1 strain USA10780 polyprotein gene, complete cds | 6651 | ..c..............g. | 6669 | 89 |
| EF682347.1 | Human poliovirus 1 strain USA10781 polyprotein gene, complete cds | 6651 | ..c..............g. | 6669 | 89 |
| EF682348.1 | Human poliovirus 1 strain USA10782 polyprotein gene, complete cds | 6651 | ..c..............g. | 6669 | 89 |
| EF682349.1 | Human poliovirus 1 strain USA10771 polyprotein gene, complete cds | 6651 | ..c..............g. | 6669 | 89 |
| EF682350.1 | Human poliovirus 1 strain USA10772 polyprotein gene, complete cds | 6651 | ..c..............g. | 6669 | 89 |
| EF682351.1 | Human poliovirus 1 strain USA10778 polyprotein gene, complete cds | 6651 | ..c..............g. | 6669 | 89 |
| EF682352.1 | Human poliovirus 1 strain USA10770 polyprotein gene, complete cds | 6651 | ..c..............g. | 6669 | 89 |
| EF682353.1 | Human poliovirus 1 strain USA10777 polyprotein gene, complete cds | 6651 | ..c..............g. | 6669 | 89 |
| EF682354.1 | Human poliovirus 1 strain USA10779 polyprotein gene, complete cds | 6651 | ..c..............g. | 6669 | 89 |
| EF682355.1 | Human poliovirus 1 strain USA10776 polyprotein gene, complete cds | 6651 | ..c..............g. | 6669 | 89 |
| EF682356.1 | Human poliovirus 1 strain USA10784, complete genome | 6677 | ..c..............g. | 6695 | 89 |
| EF682357.1 | Human poliovirus 1 strain USA10785, complete genome | 6677 | ..c..............g. | 6695 | 89 |
| EF682358.1 | Human poliovirus 1 strain USA10783, complete genome | 6677 | ..c..............g. | 6695 | 89 |
| EU794953.1 | Human poliovirus 1 isolate A21 polyprotein gene, complete cds | 6629 | ..c..............g. | 6647 | 89 |
| EU794954.1 | Human poliovirus 1 isolate A49 polyprotein gene, complete cds | 6629 | ..c..............g. | 6647 | 89 |
| EU794955.1 | Human poliovirus 1 isolate A63 polyprotein gene, complete cds | 6629 | ..c..............g. | 6647 | 89 |
| EU794956.1 | Human poliovirus 1 isolate A84 polyprotein gene, complete cds | 6629 | ..c..............g. | 6647 | 89 |
| EU794957.1 | Human poliovirus 1 isolate A88 polyprotein gene, complete cds | 6629 | ..c..............g. | 6647 | 89 |
| EU794958.1 | Human poliovirus 1 isolate A91 polyprotein gene, complete cds | 6629 | ..c..............g. | 6647 | 89 |
| EU794959.1 | Human poliovirus 1 isolate A102 polyprotein gene, complete cds | 6629 | ..c..............g. | 6647 | 89 |
| EU794960.1 | Human poliovirus 1 isolate A105 polyprotein gene, complete cds | 6629 | ..c..............g. | 6647 | 89 |
| EU794961.1 | Human poliovirus 1 isolate A118 polyprotein gene, complete cds | 6629 | ..c..............g. | 6647 | 89 |
| EU794962.1 | Human poliovirus 1 isolate A199 polyprotein gene, complete cds | 6629 | ..c..............g. | 6647 | 89 |
| EU794963.1 | Human poliovirus 1 isolate A449 polyprotein gene, complete cds | 6629 | ..c..............g. | 6647 | 89 |
| EU794964.1 | Human poliovirus 1 isolate A649 polyprotein gene, complete cds | 6629 | ..c..............g. | 6647 | 89 |
| FM955278.1 | Human coxsackievirus A17, complete genome, genomic RNA, isolate cCA17 | 6694 | ..g...........g.... | 6712 | 89 |
| FJ769378.1 | Human poliovirus 1 strain CHN8184/GZ/CHN/2004, complete genome | 6677 | ..c..............g. | 6695 | 89 |
| FJ769383.1 | Human poliovirus 1 strain CHN8225c/GZ/CHN/2004, complete genome | 6677 | ..c..............g. | 6695 | 89 |
| FJ769384.1 | Human poliovirus 1 strain CHN8248c/GZ/CHN/2004, complete genome | 6677 | ..c..............g. | 6695 | 89 |
| FJ769385.1 | Human poliovirus 1 strain CHN8264c/GZ/CHN/2004, complete genome | 6677 | ..c..............g. | 6695 | 89 |
| AY302539.1 | Human echovirus 13 strain Del Carmen complete genome | 6611 | ............t.t.... | 6629 | 89 |
| AJ577589.1 | Human echovirus 11, isolate HUN-1108, complete virion genome | 6634 | ..c.........t...... | 6652 | 89 |
| HM777023.1 | Human echovirus 18 isolate Kor05-ECV18-054cn, complete genome | 6615 | ...........tt...... | 6633 | 89 |
| U22521.1 | ETU22521 Human enterovirus 71 polyprotein gene, complete cds | 6627 | ............t....a. | 6645 | 89 |
| AF302996.1 | Enterovirus 71 strain SHZH98 polyprotein gene, complete cds | 6627 | ..c.........t...... | 6645 | 89 |
| AY465356.1 | Human enterovirus 71 strain SHZH03, complete genome | 6626 | ..c.........t...... | 6644 | 89 |
| AY421760.1 | Human coxsackievirus A2 strain Fleetwood, complete genome | 6617 | ............t....g. | 6635 | 89 |
| AY421760.1 | Human coxsackievirus A2 strain Fleetwood, complete genome | 2649 | ____...........____ | 2639 | 57 |
| AY421764.1 | Human coxsackievirus A6 strain Gdula, complete genome | 6653 | ............t....a. | 6671 | 89 |
| AY421766.1 | Human coxsackievirus A8 strain Donovan, complete genome | 6615 | ............t....g. | 6633 | 89 |
| AY421768.1 | Human coxsackievirus A12 strain Texas-12, complete genome | 6623 | ............t....g. | 6641 | 89 |
| AB204852.1 | Human enterovirus 71 genomic RNA, complete genome, sub_strain:BrCr-TR | 6627 | ............t....a. | 6645 | 89 |
| AB204853.1 | Human enterovirus 71 genomic RNA, complete genome, sub_strain:BrCr-ts | 6627 | ............t....a. | 6645 | 89 |
| DQ133458.1 | Human enterovirus 71 strain 984 polyprotein gene, complete cds | 6626 | ..c.........t...... | 6644 | 89 |
| DQ133459.1 | Human enterovirus 71 strain 1235 polyprotein gene, complete cds | 6626 | ..c.........t...... | 6644 | 89 |
| EF373576.1 | Human enterovirus 71 strain E2004104-TW-CDC polyprotein gene, complet | 6626 | ..c.........t...... | 6644 | 89 |
| EU703812.1 | Human enterovirus 71 strain EV71/Fuyang.Anhui.P.R.C/17.08/1, complete | 6626 | ..c.........t...... | 6644 | 89 |
| EU703813.1 | Human enterovirus 71 strain EV71/Fuyang.Anhui.P.R.C/17.08/2, complete | 6626 | ..c.........t...... | 6644 | 89 |
| EU703814.1 | Human enterovirus 71 strain EV71/Fuyang.Anhui.P.R.C/17.08/3, complete | 6626 | ..c.........t...... | 6644 | 89 |
| EU812515.1 | Human enterovirus 71 strain FY23 from China, complete genome | 6629 | ..c.........t...... | 6647 | 89 |
| EU864507.1 | Human enterovirus 71 isolate EV71/Zhejiang08, complete genome | 6627 | ..c.........t...... | 6645 | 89 |
| FJ158600.1 | Human enterovirus 71 isolate DTID/ZJU-62, complete genome | 6626 | ..c.........t...... | 6644 | 89 |
| FJ158601.1 | Human enterovirus 71 isolate DTID/ZJU-74, complete genome | 6626 | ..c.........t...... | 6644 | 89 |
| FJ194964.1 | Human enterovirus 71 strain EV71/GDFS/3/2008, complete genome | 6626 | ..c.........t...... | 6644 | 89 |
| FJ194965.1 | Human enterovirus 71 strain EV71/GDSG/17/2008, complete genome | 6626 | ..c.........t...... | 6644 | 89 |
| FJ360544.1 | Human enterovirus 71 isolate GZ-08-01, complete genome | 6625 | ..c.........t...... | 6643 | 89 |
| FJ360545.1 | Human enterovirus 71 isolate GZ-08-02, complete genome | 6626 | ..c.........t...... | 6644 | 89 |
| FJ360546.1 | Human enterovirus 71 isolate GZ-08-03, complete genome | 6616 | ..c.........t...... | 6634 | 89 |
| FJ439769.1 | Human enterovirus 71 strain Fuyang-0805, complete genome | 6626 | ..c.........t...... | 6644 | 89 |
| FJ606447.1 | Human enterovirus 71 strain BJ08-Z004-3, complete genome | 6626 | ..c.........t...... | 6644 | 89 |
| FJ606448.1 | Human enterovirus 71 strain BJ08-Z011-4, complete genome | 6626 | ..c.........t...... | 6644 | 89 |
| FJ606449.1 | Human enterovirus 71 strain BJ08-Z020-1, complete genome | 6626 | ..c.........t...... | 6644 | 89 |
| FJ606450.1 | Human enterovirus 71 strain BJ08-Z025-5, complete genome | 6626 | ..c.........t...... | 6644 | 89 |
| FJ713137.1 | Human enterovirus 71 strain Shanghai 036-2009, complete genome | 6628 | ..c.........t...... | 6646 | 89 |
| FJ828519.1 | Human enterovirus 71 isolate BJ08, complete genome | 6605 | ..c.........t...... | 6623 | 89 |
| FJ607334.1 | Human enterovirus 71 strain 1/SHENZHEN/08/China/HFMD/2008, complete g | 6625 | ..c.........t...... | 6643 | 89 |
| FJ607335.1 | Human enterovirus 71 strain 4/SHENZHEN/08/China/HFMD/2008, complete g | 6625 | ..c.........t...... | 6643 | 89 |
| FJ607336.1 | Human enterovirus 71 strain 28/SHENZHEN/08/China/HFMD/2008, complete | 6624 | ..c.........t...... | 6642 | 89 |
| FJ607337.1 | Human enterovirus 71 strain 121/SHENZHEN/08/China/HFMD Fatal/2008, co | 6625 | ..c.........t...... | 6643 | 89 |
| FJ607338.1 | Human enterovirus 71 strain 605/SHENZHEN/08/China/HFMD Severe/2008, c | 6625 | ..c.........t...... | 6643 | 89 |
| GQ892830.1 | Human enterovirus 71 strain GX/LZ 08-04/08/CHN, complete genome | 6626 | ..c.........t...... | 6644 | 89 |
| GQ994988.1 | Human enterovirus 71 strain Anhui1-09-China, complete genome | 6626 | ..c.........t...... | 6644 | 89 |
| GQ994989.1 | Human enterovirus 71 strain Chongqing1-09-China, complete genome | 6627 | ..c.........t...... | 6645 | 89 |
| GQ994990.1 | Human enterovirus 71 strain Chongqing2-09-China, complete genome | 6626 | ..c.........t...... | 6644 | 89 |
| GQ994991.1 | Human enterovirus 71 strain Chongqing3-09-China, complete genome | 6626 | ..c.........t...... | 6644 | 89 |
| GU196833.1 | Human enterovirus 71 strain Henan1-09-China polyprotein gene, complet | 6438 | ..c.........t...... | 6456 | 89 |
| GU366191.1 | Human enterovirus 71 strain Henan10-08-China, complete genome | 6626 | ..c.........t...... | 6644 | 89 |
| GU434678.1 | Human enterovirus 71 strain EV71-Hubei-09-China, complete genome | 6627 | ............t....a. | 6645 | 89 |
| HM003207.1 | Human enterovirus 71 strain 87-2008 Xi'an Shaanxi, complete genome | 6626 | ..c.........t...... | 6644 | 89 |
| GQ279369.1 | Human enterovirus 71 strain SZ/HK08-5, complete genome | 6626 | ..c.........t...... | 6644 | 89 |
| GQ279370.1 | Human enterovirus 71 strain SZ/HK08-6, complete genome | 6626 | ..c.........t...... | 6644 | 89 |
| HM002485.1 | Human enterovirus 71 strain BJ97, complete genome | 6626 | ..c.........t...... | 6644 | 89 |
| HM002486.1 | Human enterovirus 71 strain BJ110, complete genome | 6627 | ..c.........t...... | 6645 | 89 |
| HM002487.1 | Human enterovirus 71 strain BJ303, complete genome | 6627 | ..c.........t...... | 6645 | 89 |
| HM002488.1 | Human enterovirus 71 strain BJ366, complete genome | 6626 | ..c.........t...... | 6644 | 89 |
| HM053670.1 | Human enterovirus 71 strain BJ393, complete genome | 6626 | ..c.........t...... | 6644 | 89 |
| HM053671.1 | Human enterovirus 71 strain BJ462, complete genome | 6626 | ..c.........t...... | 6644 | 89 |
| HQ407557.1 | Human enterovirus 71 strain LN009, complete genome | 6626 | ..c.........t...... | 6644 | 89 |
| HQ188292.1 | Human enterovirus 71 strain Fuyang-0805a, complete genome | 6629 | ..c.........t...... | 6647 | 89 |
| HQ426649.1 | Human enterovirus 71 strain 2010FJLY008, complete genome | 6624 | ..c.........t...... | 6642 | 89 |
| HQ325852.1 | Human enterovirus 71 strain EV71/HENAN/DC/2010, complete genome | 6627 | ..c.........t...... | 6645 | 89 |
| HQ891925.1 | Human enterovirus 71 strain Shanghai 36-2009, complete genome | 6628 | ..c.........t...... | 6646 | 89 |
| HQ891926.1 | Human enterovirus 71 strain Shanghai 51-2009, complete genome | 6628 | ..c.........t...... | 6646 | 89 |
| HQ891929.1 | Human enterovirus 71 strain Shanghai 118-2009, complete genome | 6627 | ..c.........t...... | 6645 | 89 |
| HQ400942.1 | Human enterovirus 71 HZ08/Hangzhou/2008, complete genome | 6626 | ..c.........t...... | 6644 | 89 |
| HQ456305.1 | Human enterovirus A strain GZ2010-156, complete genome | 6626 | ..c.........t...... | 6644 | 89 |
| HQ456306.1 | Human enterovirus A strain GZ2010-134, complete genome | 6626 | ..c.........t...... | 6644 | 89 |
| HQ456307.1 | Human enterovirus A strain GZ2010-120, complete genome | 6626 | ..c.........t...... | 6644 | 89 |
| HQ456308.1 | Human enterovirus A strain GZ2010-118, complete genome | 6626 | ..c.........t...... | 6644 | 89 |
| HQ456309.1 | Human enterovirus A strain GZ08-831, complete genome | 6626 | ..c.........t...... | 6644 | 89 |
| HQ456310.1 | Human enterovirus A strain GZ08-530, complete genome | 6626 | ..c.........t...... | 6644 | 89 |
| HQ456311.1 | Human enterovirus A strain GZ08-522, complete genome | 6626 | ..c.........t...... | 6644 | 89 |
| HQ456312.1 | Human enterovirus A strain GZ08-520, complete genome | 6626 | ..c.........t...... | 6644 | 89 |
| HQ611148.1 | Human enterovirus 71 strain AH08/06, complete genome | 6626 | ..c.........t...... | 6644 | 89 |
| JN001860.1 | Human enterovirus 71 strain NB/2010/01, complete genome | 6627 | ..c.........t...... | 6645 | 89 |
| AJ132961.1 | Human poliovirus 1, complete genome. Isolated from an immunodeficient | 6678 | ..c...........g..c. | 6696 | 84 |
| AF499642.1 | Human coxsackievirus A20 strain IH35, complete genome | 6673 | ..c...........g..c. | 6691 | 84 |
| AF465514.1 | Human coxsackievirus A20 strain IH Pool 35, complete genome | 6673 | ..c...........g..c. | 6691 | 84 |
| AF538841.1 | Human poliovirus 1 isolate TCDC01-113, complete genome | 6677 | ..c..c...........g. | 6695 | 84 |
| DQ890388.1 | Human poliovirus 2 strain PER8310769, complete genome | 6676 | ..t...........t..a. | 6694 | 84 |
| DQ890388.1 | Human poliovirus 2 strain PER8310769, complete genome | 5446 | ___.........g...___ | 5458 | 63 |
| EF682359.1 | Human poliovirus 1 strain USA10786, complete genome | 6677 | ..c..c...........g. | 6695 | 84 |
| AF328683.1 | Human coxsackievirus B4 polyprotein-like gene, complete sequence | 6595 | ..t.........t....c. | 6613 | 84 |
| AY843308.1 | Human enterovirus 101 strain CIV03-10361, complete genome | 6647 | ..c.........t.g.... | 6665 | 84 |
| AF316321.2 | Enterovirus 5865/sin/000009, complete genome | 6630 | ..c.........t....a. | 6648 | 84 |
| AF352027.1 | Enterovirus 5666/sin/002209, complete genome | 6630 | ..c.........t....a. | 6648 | 84 |
| AY421765.1 | Human coxsackievirus A7 strain Parker, complete genome | 6623 | ...........tt....a. | 6641 | 84 |
| AJ586873.1 | Human enterovirus 71 gene for polyprotein, isolate EV71/9/97/SHA89 | 6630 | ..c.........t....a. | 6648 | 84 |
| DQ341362.1 | Human enterovirus 71 isolate SB12736-SAR-03, complete genome | 6631 | ..c.........t....a. | 6649 | 84 |
| DQ341363.1 | Human enterovirus 71 isolate S19841-SAR-03, complete genome | 6631 | ..c.........t....a. | 6649 | 84 |
| DQ341364.1 | Human enterovirus 71 isolate 5511-SIN-00, complete genome | 6631 | ..c.........t....a. | 6649 | 84 |
| DQ341365.1 | Human enterovirus 71 isolate PP37-MAL-01, complete genome | 6630 | ..c.........t....a. | 6648 | 84 |
| DQ341366.1 | Human enterovirus 71 isolate SB2864-SAR-00, complete genome | 6630 | ..c.........t....a. | 6648 | 84 |
| AM396585.1 | Human enterovirus 71 gene for polyprotein, genomic RNA, isolate ENT/P | 6627 | ............t.g..g. | 6645 | 84 |
| AM396587.1 | Human enterovirus 71 gene for polyprotein, genomic RNA, isolate UH1/P | 6630 | ..c.........t....a. | 6648 | 84 |
| EF373575.1 | Human enterovirus 71 strain E2002042-TW-CDC polyprotein gene, complet | 6632 | ..c.........t....a. | 6650 | 84 |
| GQ279371.1 | Human coxsackievirus A16 strain SZ/HK08-7, complete genome | 6629 | ...........tt....a. | 6647 | 84 |
| AB575917.1 | Human enterovirus 71 gene for polyprotein, complete cds, isolate: 101 | 6582 | ..t.........t....g. | 6600 | 84 |
| AB575938.1 | Human enterovirus 71 gene for polyprotein, complete cds, isolate: 100 | 6601 | ..g.........t....g. | 6619 | 84 |
| HQ269389.1 | Human coxsackievirus A16 isolate XM-CA16-3560, complete genome | 6630 | ...........tt....a. | 6648 | 84 |
| HQ423142.1 | Human enterovirus 71 strain KMM/09, complete genome | 6626 | ..t.........t....c. | 6644 | 84 |
| HQ423143.1 | Human enterovirus 71 strain KM186/09, complete genome | 6626 | ..t.........t....c. | 6644 | 84 |
| HQ456313.1 | Human enterovirus A strain GZ2010-95, complete genome | 6626 | ..c.........t....c. | 6644 | 84 |
| D00625.1 | POL2CG1 Human poliovirus 2 genomic RNA, complete genome | 5443 | .g..........g...___ | 5458 | 73 |
| M12197.1 | POL2LAN Poliovirus type 2 (Lansing strain), complete genome | 5443 | .g..........g...___ | 5458 | 73 |
| AF405666.1 | Human poliovirus 1 isolate HAI01007, complete genome | 5444 | .g..........g...___ | 5459 | 73 |
| AY238473.1 | Human poliovirus 2 strain MEF-1 polyprotein gene, complete cds | 5443 | .g..........g...___ | 5458 | 73 |
| FJ914252.2 | Human poliovirus 3 strain SWI10947, complete genome | 5439 | .g..........g...___ | 5454 | 73 |
| FJ914252.2 | Human poliovirus 3 strain SWI10947, complete genome | 2300 | ______...........__ | 2310 | 57 |
| X80059.1 | Echo Virus 11 genomic DNA | 6641 | ..c.........t.t..a. | 6659 | 78 |
| AF085363.1 | Coxsackievirus B2 strain Ohio-1 polyprotein gene, complete cds | 6608 | ..c.........t.t..g. | 6626 | 78 |
| AF162711.1 | Echovirus 30 strain Bastianni, complete genome | 6637 | ..t..........gc..g. | 6655 | 78 |
| AF081485.1 | Coxsackievirus B2 strain Ohio, complete genome | 6608 | ..c.........t.t..g. | 6626 | 78 |
| AF311938.1 | Human echovirus 30 strain Bastianni, complete genome | 6642 | ..t..........gc..g. | 6660 | 78 |
| AJ276224.1 | Human echovirus 11 genomic RNA for polyprotein | 6632 | ..t..........gt..g. | 6650 | 78 |
| AF524867.1 | Human echovirus 9 isolate DM, complete genome | 6656 | ..c.........t.c..a. | 6674 | 78 |
| AJ493062.2 | Human enterovirus 77 gene for polyprotein, genomic RNA, isolate CF496 | 6617 | ..t..........gc..g. | 6635 | 78 |
| AY302546.1 | Human echovirus 20 strain JV-1 complete genome | 6596 | ...........tt.t..g. | 6614 | 78 |
| AY302549.1 | Human echovirus 25 strain JV-4 complete genome | 6628 | ..t.........t.c..c. | 6646 | 78 |
| AY302551.1 | Human echovirus 27 strain Bacon complete genome | 6613 | ..t.........t.c..a. | 6631 | 78 |
| AY302554.1 | Human echovirus 31 strain Caldwell complete genome | 6634 | ..g.........t.t..g. | 6652 | 78 |
| AY556057.1 | Enterovirus 74 strain USA/CA75-10213, complete genome | 6611 | ..c..........gc..a. | 6629 | 78 |
| AY896762.1 | Human enterovirus B strain CBV3-11059-99 from Uzbekistan polyprotein | 6582 | ..t..........gt..g. | 6600 | 78 |
| AY896765.1 | Human enterovirus B strain EV7-15936-01 from Azerbaijan polyprotein g | 6605 | ..t..........gt..g. | 6623 | 78 |
| AY843303.1 | Human enterovirus 85 strain BAN00-10353, complete genome | 6623 | ..t..........gt..a. | 6641 | 78 |
| AY843307.1 | Human enterovirus 97 strain BAN99-10355, complete genome | 6614 | ..t..........gt..g. | 6632 | 78 |
| AB426611.1 | Human enterovirus 97 genomic RNA, complete genome, strain: DT94-0227 | 6614 | ..t..........gc..g. | 6632 | 78 |
| FJ357838.1 | Human coxsackievirus B3 strain GZ803, complete genome | 6604 | ..c.........t.t..g. | 6622 | 78 |
| GU109481.1 | Human coxsackievirus B3 strain SSM-CVB3, complete genome | 6599 | ..c.........t.t..g. | 6617 | 78 |
| HM775882.1 | Human echovirus 5 isolate Kor06-ECV5-253cn, complete genome | 6631 | ...........tt.c..c. | 6649 | 78 |
| AF119795.2 | Enterovirus 71 strain TW/2272/98 polyprotein gene, complete cds | 6627 | ..g.........t.g..g. | 6645 | 78 |
| AF136379.1 | Enterovirus 71 isolate NCKU9822 polyprotein mRNA, complete cds | 6629 | ..g.........t.g..g. | 6647 | 78 |
| AF119796.3 | Enterovirus 71 strain TW/2086/98 polyprotein gene, complete cds | 6627 | ..g.........t.g..g. | 6645 | 78 |
| AF176044.1 | Enterovirus 71 polyprotein gene, complete cds | 6630 | ..g.........t.g..g. | 6648 | 78 |
| AF304457.1 | Enterovirus 71 strain Tainan/5746/98 polyprotein mRNA, complete cds | 6629 | ..g.........t.g..g. | 6647 | 78 |
| AF304458.1 | Enterovirus 71 strain Tainan/4643/98 polyprotein mRNA, complete cds | 6629 | ..g.........t.g..g. | 6647 | 78 |
| AF304459.1 | Enterovirus 71 strain Tainan/6092/98 polyprotein mRNA, complete cds | 6629 | ..g.........t.g..g. | 6647 | 78 |
| AY421767.1 | Human coxsackievirus A10 strain Kowalik, complete genome | 6628 | ..g.........t..a.c. | 6646 | 78 |
| DQ060149.1 | Human enterovirus 71 strain pinf7-54A from Taiwan, complete genome | 6629 | ..g.........t.g..g. | 6647 | 78 |
| DQ341357.1 | Human enterovirus 71 isolate 7F-AUS-6-99, complete genome | 6628 | ..g.........t.g..g. | 6646 | 78 |
| DQ381846.1 | Human enterovirus 71 strain 6F/AUS/6/99, complete genome | 6628 | ..g.........t.g..g. | 6646 | 78 |
| FJ172159.1 | Human enterovirus 71 isolate NUH0075/SIN/08, complete genome | 6589 | ..g.........t.g..a. | 6607 | 78 |
| AB550332.1 | Human enterovirus 71 genomic RNA, complete genome, strain: 1095-org | 6628 | ..g.........t.g..g. | 6646 | 78 |
| AB550333.1 | Human enterovirus 71 genomic RNA, complete genome, strain: 1095-LPS1 | 6628 | ..g.........t.g..g. | 6646 | 78 |
| AB575939.1 | Human enterovirus 71 gene for polyprotein, complete cds, isolate: 365 | 6559 | ..g.........t.g..g. | 6577 | 78 |
| AB575941.1 | Human enterovirus 71 gene for polyprotein, complete cds, isolate: 248 | 6567 | ..g.........t.g..a. | 6585 | 78 |
| AB575942.1 | Human enterovirus 71 gene for polyprotein, complete cds, isolate: 369 | 6562 | ..g.........t.g..a. | 6580 | 78 |
| AB575948.1 | Human enterovirus 71 gene for polyprotein, complete cds, isolate: 101 | 6585 | ..g.........t.g..a. | 6603 | 78 |
| DQ246620.1 | Human echovirus 30 strain Echo30/Zhejiang/17/03/CSF, complete genome | 686 | _..c.........a..___ | 700 | 68 |
| AY560657.1 | Human poliovirus 1 strain Brunhilde, complete genome | 5451 | ___.........g...___ | 5463 | 63 |
| EU144042.1 | Human coxsackievirus B3 isolate CVB3-MCH polyprotein gene, complete c | 6243 | __...........______ | 6253 | 57 |